| E Fishn C | 26 | MS5563AU | 155096 | Cooke, Robert J. | B1 |
| E-Sea-U | 25 | MS7632WH | 2992 | Mendes, Arthur | CL |
| E.S.S. Pride | 145 | 1099267 | 154806 | Foster, Michael G. | SS |
| E.S.S. Pride | 145 | 1099267 | 156139 | Huston, David | SS |
| E.S.S. Pride | 145 | 1099267 | 150038 | Truex, Martin L. | B3 |
| E.S.S. Pursuit | 145 | 1132302 | 156680 | Truex, Martin L. | B3 |
| E2 | 19 | MS5384KH | 156259 | Ligenza, Theodore J. | IN |
| Eagle | 32 | MS0944G | 4622 | Carullo, Francis C. | CL |
| Earl | 20 | MS4563S | 149003 | Pittenger, Daniel R. | IN |
| Early Bird | 21 | 650263 | 145467 | Pimental Jr., Vincent | B1 |
| Early Times | 44 | 689215 | 4885 | Connors, Daniel E. | OL |
| Eastern | 22 | MS0917RE | 131912 | Zielinski, Richard E. | B1 |
| Eastern | 18 | MS0002WJ | 163186 | Jackson Iii, William J. | IN |
| Eastern Point | 31 | 1200478 | 166423 | Evans, Thomas M. | B1 |
| Eastern Shore | 24 | MS9565B | 139480 | Cabral, Jarrod J. | B1 |
| Eastern Skies | 22 | MS8632AA | 5371 | Church, Bryan E. | CL |
| Eastern Viking | 35 | 613381 | 105608 | Miller, Edward E. | B1 |
| Eastwind | 22 | MS7581AS | 156949 | Kroeger, Robert H. | B1 |
| Easy Livin Ii | 40 | 961753 | 7115 | Olson Jr., Albert W. | CL |
| Easy Money | 22 | MS8577KR | 101801 | Linnell, John M. | B1 |
| Echo | 21 | MS3135K | 139498 | Gregory, Michael K. | B1 |
| Eclipse | 23 | MS6097BA | 163494 | Ruge, Shaun C. | B1 |
| Edgartown | 84 | 601353 | 152156 | Nordic Inc | ON |
| Edith May | 20 | MS9839KB | 84732 | Peters, Stephen F. | CL |
| Edma | 35 | 1210914 | 131656 | Shepherd, Daniel F. | B1 |
| Edmund-Z | 38 | 1122116 | 2196 | Zdanowicz, Michael W. | CL |
| Edna Grace | 38 | 958988 | 5931 | Sullivan, Mary | CL |
| Edward & Joseph | 47 | 591810 | 142023 | Dodge, Charlie S. | ON |
| Edward L. Moore | 80 | 597172 | 153953 | Rafaella Llc | ON |
| Eelman | 18 | MS2002DL | 155134 | Lane, David J. | B1 |
| Ef N | 20 | MS1909ZC | 162966 | Clark, Mitchell R. | SS |
| Egret | 34 | MS0203DB | 4249 | Beane, Dwight W. | CL |
| Eileen Marie | 88 | 670742 | 107916 | Eileen Marie Fishing Inc | ON |
| Eileen Rita | 74 | 632915 | 166090 | Stacy Lee Inc | B2 |
| El Jefe | 23 | MS9476AD | 159188 | Smith, Anthony R. | B1 |
| El-Mo | 27 | MS5468ZE | 110042 | Costa, David J. | B1 |
| Elaine | 20 | MS1679AC | 117662 | Russell, Timothy P. | IN |
| Eliminator | 22 | MS2095HC | 2862 | Loring, Michael | B1 |
| Elizabeth & Niki | 88 | 612570 | 4386 | Elizabeth Niki Fishing Corp. | OL |
| Elizabeth A Ii | 15 | MS8505C | 7059 | Beaudoin, Richard R. | CL |
| Elizabeth Ann | 39 | MS1123AW | 2041 | Patterson, Thomas C. | CL |
| Elizabeth Ann | 39 | 1110125 | 139818 | Confalone, Peter S. | B1 |
| Elizabeth Ann | 50 | 576586 | 155067 | Kendall, Peter T. | B1 |
| Elizabeth Ann | 30 | 960550 | 133229 | Baptista, Robert D. | RR |
| Elizabeth B | 25 | MS3662AV | 162959 | Betti, Robert C. | RR |
| Elizabeth M | 42 | 6482911 | 161706 | Mentuck, Michael A. | B1 |
| Elizabeth Marie | 32 | 1141470 | 131885 | Green, Robert T. | B1 |
| Elizabeth Marie | 38 | 909502 | 131602 | Reis, Jorge | B1 |
| Ella Briggs | 35 | 947396 | 3775 | Caldwell, Dylan H. | CL |
| Ellen Sea | 35 | MS0003KJ | 3051 | Jason, Kenneth P. | CL |
| Elli Mae | 25 | MS6119AU | 145645 | Peavey, Don A. | B1 |
| Ellie A Ii | 37 | MS0083EA | 1018 | Allen, Michael T. | CL |
| Ellie B (Fadden) | 42 | MS5916AR | 4429 | Fadden, Peter M. | CL |
| Ellie J | 35 | 1186145 | 157602 | Murphy, Russell W. | B1 |
| Elmo | 24 | MS9613A | 133663 | Barnes Jr., Ronald R. | B1 |
| Elsie Iii | 32 | 1218153 | 56716 | Mcgillicuddy, Dennis J. | B1 |
| Elyse Rose | 26 | 1760 | Callahan, Patrick | CL | |
| Emaly B | 15 | MS3300AJ | 84952 | Bryson, Robert E. | IN |
| Emerald | 19 | MS1446AP | 20302 | Haskell, Francis P. | CL |
| Emily Anne | 27 | MS1215EM | 131514 | Meads, James J. | B1 |
| Emily Ellen | 16 | MS1468AZ | 166479 | Goerges, Claus O. | B1 |
| Emily Kate | 35 | 1116195 | 5209 | Whelan, Steven C. | CL |
| Emily Laurel Ii | 25 | MS8189AV | 159640 | Corbett, James S. | B1 |
| Emily Rose | 40 | 955822 | 598 | Haviland, John D. | CL |
| Emma Irene | 40 | 1238811 | 10354 | Pickard, Samuel W. | CL |
| Emma Irene | 40 | 1238811 | 161787 | Pickard, Benjamin T. | SL |
| Emma Irene | 40 | 1238811 | 155914 | Pickard, Samuel W. | SL |
| Emma Irene | 40 | 1238811 | 4592 | Prager, Jill P. | CL |
| Emma Irene | 40 | 1238811 | 346 | Pickard, Jeffrey W. | CL |
| Emma Irene | 40 | 1238811 | 157186 | Pickard, Iris R. | SL |
| Emma Jack | 35 | 1054483 | 93745 | Harney, Michael W. | B1 |
| Emma Rose | 40 | 1201510 | 5024 | King, Zachary J. | CL |
| Emmalynn | 27 | MS3920AN | 153262 | Schnitzer, Robert K. | RR |
| Endeavor | 34 | 1170230 | 132667 | Sloane, Robert | CL |
| Endeavor | 93 | 926487 | 142251 | Hansen Scalloping Inc | ON |
| Endeavor | 42 | 557094 | 6895 | Shea, Kevin R. | CL |
| Endeavour | 141 | 933903 | 144203 | F/V Endeavour, Inc. | B3 |
| Endurance | 36 | 1129114 | 85874 | Cullati, Francis J. | B1 |
| Endurance | 29 | 595369 | 145018 | Costa, Douglas J. | B1 |
| Endurance | 23 | MS1901AL | 155546 | Mandly, William R. | RR |
| Endurance | 40 | MS2762HD | 5536 | Hurley, Patrick M. | CL |
| Endurance | 107 | 657549 | 142508 | Sai Fisheries, Inc. (Estudante) | ON |
| Endurance | 33 | 904716 | 159714 | Driscoll, Stephen R. | B1 |
| Enki | 22 | MS6965AH | 137326 | Martinez, Thomas A. | B1 |
| Enoch | 30 | MS7436AK | 145001 | Berggren Jr., Gerald R. | B1 |
| Enterprise | 117 | 664958 | 151402 | Lundmarr Trawlers Llc | B3 |
| Equinox | 44 | MS4029AY | 6992 | Dowd, Thomas H. | B1 |
| Erica Ann | 27 | MS5591KA | 3731 | Wonson Iii, Arthur S. | CL |
| Erica Lee | 42 | 646797 | 148945 | Yeomans, Robert J. | B1 |
| Erica Lee Ii | 48 | 1112203 | 139904 | Yeomans, Robert E. | B1 |
| Erica Rose | 32 | MS0035ER | 2444 | Mccarthy, Joseph F. | CL |
| Erin H | 36 | 640913 | 165381 | Hussey, Robert D. | B1 |
| Erin Lynn | 34 | 505634 | 1278 | Morey, Dennis P. | CL |
| Erin Sinead | 42 | MS8830AV | 5654 | Coyne Jr., Richard P. | CL |
| Erin'S Hope | 35 | MS8796DT | 1840 | O'Connell, David T. | CL |
| Esca | 24 | MS0023SA | 100488 | St Aubin, Judd L. | B1 |
| Escapades | 33 | 956789 | 166199 | Smith, Thomas M. | B1 |
| Escape | 24 | MS9872AA | 160703 | Zilinsky, Brian | SR |
| Escape | 35 | 1163557 | 150890 | Betti, Robert C. | RR |
| Ess Endeavor | 145 | 166283 | 163428 | Meyers, Harold | B3 |
| Ess Pursuit | 145 | 1132302 | 160782 | Parlett, William E. | SS |
| Ess Pursuit | 145 | 1132302 | 159555 | Mohr, Michael G. | SS |
| Esther'S Pride | 34 | MS2574ST | 2143 | Larsen, Stephen W. | CL |
| Ethel A Ii | 20 | MS2824AG | 5574 | Alley Iii, Albion A. | CL |
| Evan Christine | 59 | 659797 | 151986 | Loftes Fisheries Inc | B1 |
| Evangeline | 35 | MS0724ER | 6360 | Rodegast, Eric S. | CL |
| Evelyn C | 30 | MS4443HC | 1867 | Cook, Edward W. | CL |
| Evening Prayer | 60 | 538893 | 144769 | Maguire, Kevin J. | OL |
| Exaggerator | 26 | MS5659AL | 7461 | Marcella, Douglas S. | CL |
| Excavator Ii | 37 | 638405 | 51571 | Leahy, Edward A. | B1 |
| Excellent Adventure | 28 | 958041 | 156603 | Savoia, Mario V. | B1 |
| Expectation | 70 | 602888 | 156412 | Nordic Fisheries, Inc. | B2 |
| Explorer | 89 | 618325 | 144152 | Vinjerud Ii, Lars | B2 |
| Explorer Ii | 46 | 621654 | 84829 | Explorer Ii Corp. | OL |
| Ez Snoozer | 20 | MS8733FB | 57844 | Brehaut, Kenneth P. | B1 |
| Ezyduzit | 32 | MS1703KJ | 94192 | Chaprales, William C. | B1 |